@tangming2005: š§µ Why the obsession with p <...
@tangming2005
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May 02, 2026
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This meme says it all.
p = 0.0501? Pain.
p = 0.0499? Pure euphoria.
Two numbers. Nearly identical. Yet we treat them like night and day.
Why?
This meme says it all.
p = 0.0501? Pain.
p = 0.0499? Pure euphoria.
Two numbers. Nearly identical. Yet we treat them like night and day.
Why?
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2/
The 0.05 p-value threshold is arbitrary.
It came from R.A. Fisher in the 1920s.
And weāve been worshipping it like a sacred line ever since.
But itās not magic. It's convention.
The 0.05 p-value threshold is arbitrary.
It came from R.A. Fisher in the 1920s.
And weāve been worshipping it like a sacred line ever since.
But itās not magic. It's convention.
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What does p < 0.05 actually mean?
It means:
If the null hypothesis is true, thereās a 5% chance weād see this extreme of a result by random chance.
Thatās it.
Not: "This is true."
Not: "This will replicate."
What does p < 0.05 actually mean?
It means:
If the null hypothesis is true, thereās a 5% chance weād see this extreme of a result by random chance.
Thatās it.
Not: "This is true."
Not: "This will replicate."
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p = 0.0499 and p = 0.0501 are nearly identical.
But one gets you a āsignificantā label.
The other gets dismissed.
Thatās broken thinking.
p = 0.0499 and p = 0.0501 are nearly identical.
But one gets you a āsignificantā label.
The other gets dismissed.
Thatās broken thinking.
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5/
Quoting Mike Love:
āA smaller p-value is not more interesting.ā
āWe should focus on effect sizes.ā
Heās right.
Quoting Mike Love:
āA smaller p-value is not more interesting.ā
āWe should focus on effect sizes.ā
Heās right.
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Whatās an effect size?
It tells you how big the difference is.
Not just if itās statistically detectable.
A gene with a log2 fold change of 3 matters.
Even if p = 0.06.
Whatās an effect size?
It tells you how big the difference is.
Not just if itās statistically detectable.
A gene with a log2 fold change of 3 matters.
Even if p = 0.06.
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P-values shrink with more data.
Got 10,000 samples?
Youāll find āsignificanceā for even the tiniest differences.
Statistically significant ā Biologically meaningful.
P-values shrink with more data.
Got 10,000 samples?
Youāll find āsignificanceā for even the tiniest differences.
Statistically significant ā Biologically meaningful.
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Also, be careful when testing thousands of genes.
Even with a p < 0.05 threshold, false positives will sneak in.
Use multiple testing correction: FDR, Bonferroni. Always.
Also, be careful when testing thousands of genes.
Even with a p < 0.05 threshold, false positives will sneak in.
Use multiple testing correction: FDR, Bonferroni. Always.
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Letās reframe:
Instead of:
āDid I beat the p < 0.05 line?ā
Ask:
Is the effect meaningful?
Is it reproducible?
Does it make biological sense?
Letās reframe:
Instead of:
āDid I beat the p < 0.05 line?ā
Ask:
Is the effect meaningful?
Is it reproducible?
Does it make biological sense?
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Want a better practice?
Look at the distribution of p-values.
Report adjusted p-values (FDR).
Highlight effect sizes.
Donāt cherry-pick.
Want a better practice?
Look at the distribution of p-values.
Report adjusted p-values (FDR).
Highlight effect sizes.
Donāt cherry-pick.
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And donāt forget confidence intervals.
They show the range of plausible effect sizesānot just a binary yes/no.
More context, more truth.
And donāt forget confidence intervals.
They show the range of plausible effect sizesānot just a binary yes/no.
More context, more truth.
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Key takeaways:
0.05 is a line in sand, not a cliff
p-values ā effect size
Focus on biological meaning
Always correct for multiple testing
Use p-values as part of the storyānot the whole story
Key takeaways:
0.05 is a line in sand, not a cliff
p-values ā effect size
Focus on biological meaning
Always correct for multiple testing
Use p-values as part of the storyānot the whole story
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If you're making big decisions based on p = 0.0499 vs 0.0501...
You're not doing science.
You're doing stats theater.
Look deeper. Think harder. Go beyond the stars.
If you're making big decisions based on p = 0.0499 vs 0.0501...
You're not doing science.
You're doing stats theater.
Look deeper. Think harder. Go beyond the stars.
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And pleaseāshare this with a friend still chasing tiny p-values.
Letās stop celebrating noise
and start celebrating insight.
And pleaseāshare this with a friend still chasing tiny p-values.
Letās stop celebrating noise
and start celebrating insight.
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